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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49589099_49604490_F

Intron Information:

Intron Rank:

142069

Intron Class:

major

Intron Phase:

Intron Coordinates:

49589099 - 49604490

Intron Length:

15392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATGCATTTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.8

0.85

0.6

81.8

30.3

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

56.1

0.27

2.1

78.5

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026730

49549547 - 49604545

54999