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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49623533_49706727_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49623533 - 49706727

Intron Length:

83195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GAGGAGCAAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TCTGGTTTAACT

Flanking Amino Acid:

VAKAYSVVKEGTVLKSNSEP

Intron Amino Acid Position:

2002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

38.3

-0.6

1.6

25.1

35.9

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

0.46

1.9

78.9

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008192

49623500 - 49746089

122590