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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49706273_49706727_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49706273 - 49706727

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTGTATTAATT

Flanking Amino Acid:

VAKAYSVVKEGITDTAQTIY

Intron Amino Acid Position:

2002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

56.8

0.15

1.2

58.3

40.6

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

66.3

0.59

1.7

84.39

36.6

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028864

49705626 - 49746089

40464