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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49707889_49708103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49707889 - 49708103

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTGTCTTCATT

Flanking Amino Acid:

VGPMHSLVQLVQGLKDLVWL

Intron Amino Acid Position:

1900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.7

0.9

77.8

35.2

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

56.3

0.28

1.9

74.4

43.5

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028864

49705626 - 49746089

40464

ENSAPLT00000008192

49623500 - 49746089

122590