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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49725539_49725886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49725539 - 49725886

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CAGTCAGTAATT

Flanking Amino Acid:

GLVSIFTDVKQEDGNILEGK

Intron Amino Acid Position:

1071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

0.82

0.8

24.9

Major PPT

80.5

0.69

0.8

77.2

31.5

Minor 5ss

-2.2

3.3

45.6

Minor BPS

47.5

-0.1

2.2

65.88

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008192

49623500 - 49746089

122590

ENSAPLT00000028864

49705626 - 49746089

40464