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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49733767_49734391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49733767 - 49734391

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGTTTCTTACTA

Flanking Amino Acid:

TETARTPSSREEEVFFSMAD

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

85.5

30.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

76.5

0.6

0.9

71.1

39.6

Minor 5ss

29.1

-2.4

3.8

39.2

40.5

Minor BPS

66.9

0.53

1.6

75.34

36.5

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028864

49705626 - 49746089

40464

ENSAPLT00000008192

49623500 - 49746089

122590