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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49734575_49735449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49734575 - 49735449

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTAATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTCTTCTTAATT

Flanking Amino Acid:

LDMVAAIAGPESLSRIELSN

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.7

80.3

38.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

75.7

0.58

0.9

74.8

33.8

Minor 5ss

21.7

-3.3

3.8

30.5

43.3

Minor BPS

77.4

0.94

1.1

83.97

37.3

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028864

49705626 - 49746089

40464

ENSAPLT00000008192

49623500 - 49746089

122590