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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49737657_49738140_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49737657 - 49738140

Intron Length:

484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAATAA

5'SS Class:

major

3'SS Sequence:

GTAACATTTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATCTCTGTAACA

Flanking Amino Acid:

SSPVCSATQLATEPKLSPSW

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

31.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

59.9

0.22

1.2

61.2

43.7

Minor 5ss

36.7

-1.5

3.1

43.7

45.9

Minor BPS

60.9

0.34

73.1

39.3

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028864

49705626 - 49746089

40464

ENSAPLT00000008192

49623500 - 49746089

122590