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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49740371_49742160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49740371 - 49742160

Intron Length:

1790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGCTTG

5'SS Class:

major

3'SS Sequence:

TCTTACTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CTTCTCTTACTT

Flanking Amino Acid:

EMVFRPRPRLASGSEPMYWS

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

62.4

44.7

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

86.1

0.81

0.8

31.8

Minor 5ss

46.2

-0.4

3.2

60.4

45.8

Minor BPS

60.9

0.42

1.6

76.4

40.9

Associated Gene:

Gene:

ATG2B

Ensembl Gene ID:

ENSAPLG00000007773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028864

49705626 - 49746089

40464

ENSAPLT00000008192

49623500 - 49746089

122590