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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49751812_49752318_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
49751812 - 49752318

Intron Length:
507

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGATGGCG

5'SS Class:
major

3'SS Sequence:
TTGTATATTGCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TACAAAT

U12 Branch Point Sequence:
ATTTGCATACAA

Flanking Amino Acid:
DSYCGRNIGEYLSKCVVGAS

Intron Amino Acid Position:
29

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1
59.4
39.5

Major BPS
69.5
0.48
1
73.5
28.6

Major PPT
80.2
0.68
0.9
74.3
39.8

Minor 5ss
24.2
-3
3.2
29.9
43.1

Minor BPS
45.1
-0.3
2.3
64.03
42

Associated Gene:

Gene:
AK7

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49751728 - 49775041
23314

49751728 - 49775041
23314