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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49753738_49754738_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
49753738 - 49754738

Intron Length:
1001

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTTAGTATA

5'SS Class:
major

3'SS Sequence:
TTTTGTTTACCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTACAA

U12 Branch Point Sequence:
TTTACAATAAAT

Flanking Amino Acid:
QIEEAKWAASALHTEIEHFA

Intron Amino Acid Position:
125

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1.1
80.9
32.7

Major BPS
73.5
0.59
1
81.3
29.9

Major PPT
83.7
0.76
0.9
78
40.1

Minor 5ss
35.8
-1.6
2.6
41.2
39

Minor BPS
53.8
0.2
2
81.05
39.5

Associated Gene:

Gene:
AK7

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49751728 - 49775041
23314

49751728 - 49775041
23314