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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49764818_49765807_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
49764818 - 49765807

Intron Length:
990

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
GCTTTTGTTTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCAAAT

U12 Branch Point Sequence:
CAATCATTTATT

Flanking Amino Acid:
TYDQAKELFNLEDEDEEEEI

Intron Amino Acid Position:
492

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
77.8
36.6

Major BPS
77.3
0.68
1
81.5
27

Major PPT
78.7
0.65
0.9
76.9
37.3

Minor 5ss
41.3
-1
2.8
62.9
41

Minor BPS
49.7
0.06
1.9
67.11
43.6

Associated Gene:

Gene:
AK7

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49751728 - 49775041
23314

49751728 - 49775041
23314