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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49788235_49788709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49788235 - 49788709

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTT

5'SS Class:

strong_major

3'SS Sequence:

TAAACGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTTGTGTTAATA

Flanking Amino Acid:

GSYRLGVHTKGADIDALCVA

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

27.7

Major BPS

84.4

0.85

34.5

Major PPT

66.3

0.37

54.9

45.1

Minor 5ss

43.2

-0.7

3.3

64.8

46.5

Minor BPS

50.8

0.02

2.1

65.77

41.9

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861