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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49792823_49793959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49792823 - 49793959

Intron Length:

1137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

GCCAATGTAACA

Flanking Amino Acid:

LDIRCIRSLNGCRVTDEILH

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

85.6

0.8

0.9

84.2

30.7

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

42.8

-0.5

2.1

49.16

41.8

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861