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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49795541_49796963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49795541 - 49796963

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTAGTGTA

5'SS Class:

major

3'SS Sequence:

TTGTTATATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TATGCTTGAAGA

Flanking Amino Acid:

NLNLPVWDPRVNPSDRYHLM

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

73.6

37.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.56

0.9

71.2

Minor 5ss

32.2

-2

3.1

33.8

41.6

Minor BPS

51.3

0.04

1.8

65.04

41.5

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861