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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49802744_49803470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49802744 - 49803470

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

AACATTTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATAAGTAACA

Flanking Amino Acid:

SAPTEKQRLEWVGLVESKIR

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

68.9

0.42

62.5

42.5

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

46.5

-0.2

2.3

64.15

41.3

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006970

49777077 - 49817937

40861

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612