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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49805290_49806791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49805290 - 49806791

Intron Length:

1502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTAATTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTATTCTAATT

Flanking Amino Acid:

TYDIQSFTDTVYRQAINSKM

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.6

0.67

0.9

73.3

36.7

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

54.6

0.22

1.7

73.62

37.4

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861