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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49806914_49808596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49806914 - 49808596

Intron Length:

1683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGATGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATC

Flanking Amino Acid:

PNHVLQKKKKHSTEGVRLTA

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

63.8

0.31

1.2

58.7

46.1

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

70.8

0.64

1.7

81.67

33.1

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861