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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49810191_49811682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49810191 - 49811682

Intron Length:

1492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

TATTTACCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AATTATTTACCC

Flanking Amino Acid:

PQTNSSESSGGTSSESIPQT

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

65.8

41.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

72.6

0.51

0.8

66.9

34.1

Minor 5ss

29.6

-2.3

3.2

30.1

Minor BPS

55.4

0.15

1.8

66.89

38.5

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861