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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49811904_49812292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49811904 - 49812292

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGAG

5'SS Class:

major

3'SS Sequence:

GCTTGCATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

ESPKKIKIEEQDEISEDSSC

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

66.9

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.9

0.56

0.9

70.2

40.1

Minor 5ss

38.2

-1.3

3.1

48.8

47.4

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861