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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49812359_49815511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49812359 - 49815511

Intron Length:

3153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

AGTGGTGTAACT

Flanking Amino Acid:

VNEHEKMETKEQLETEVNVN

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

45.1

-0.2

2.4

66.31

44.7

Associated Gene:

Gene:

PAPOLA

Ensembl Gene ID:

ENSAPLG00000006645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040329

49777077 - 49818484

41408

ENSAPLT00000029727

49777077 - 49815688

38612

ENSAPLT00000006970

49777077 - 49817937

40861