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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49864106_49865514_R

Intron Information:

Intron Rank:

144815

Intron Class:

major

Intron Phase:

Intron Coordinates:

49864106 - 49865514

Intron Length:

1409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GATCACTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GACCCATTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

74.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

61.1

0.25

54.1

40.8

Minor 5ss

30.2

-2.3

3.3

38.5

46.8

Minor BPS

54.7

0.14

1.6

60.37

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035963

49862438 - 49865973

3536