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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49934162_49939172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49934162 - 49939172

Intron Length:

5011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTTACT

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

TTGTCTTGAGTT

Flanking Amino Acid:

GDLQTNPRQKKKRKAAVATN

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.2

71.1

38.3

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

86.4

0.82

0.8

80.4

36.6

Minor 5ss

40.9

-1

2.4

53.6

42.9

Minor BPS

58.1

0.33

1.7

76.51

40.7

Associated Gene:

Gene:

VRK1

Ensembl Gene ID:

ENSAPLG00000006288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023857

49899184 - 49939391

40208

ENSAPLT00000006567

49884589 - 49939391

54803

ENSAPLT00000039532

49899184 - 49947806

48623