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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49939267_49947723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49939267 - 49947723

Intron Length:

8457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

GATTGAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTTTTTTTGATT

Flanking Amino Acid:

SPAKKKPTSSKAVATRTRQM

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

64.3

41.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

68.5

0.42

1.1

59.8

44.8

Minor 5ss

35.4

-1.7

2.9

42.9

39.2

Minor BPS

70.4

0.72

1.1

81.5

34.7

Associated Gene:

Gene:

VRK1

Ensembl Gene ID:

ENSAPLG00000006288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039532

49899184 - 49947806

48623