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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49970954_49975226_F

Intron Information:

Intron Rank:

124728

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49970954 - 49975226

Intron Length:

4273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTACGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTAACTTTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

59.1

0.2

1.1

59.9

39.9

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

59.4

0.38

1.7

76.4

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030818

49970809 - 50051960

81152