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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49975356_49977233_F

Intron Information:

Intron Rank:

124729

Intron Class:

major

Intron Phase:

Intron Coordinates:

49975356 - 49977233

Intron Length:

1878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.8

86.6

31.3

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030818

49970809 - 50051960

81152