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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4998374_5043504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4998374 - 5043504

Intron Length:

45131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAG

5'SS Class:

major

3'SS Sequence:

AATTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATCC

Flanking Amino Acid:

SVPCLNGASQIACGSEHNLA

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

71.5

39.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

84.4

0.77

0.8

81.5

35.1

Minor 5ss

31.7

-2.1

3.1

39.3

46.2

Minor BPS

64.9

0.45

1.7

78.93

36.4

Associated Gene:

Gene:

SERGEF

Ensembl Gene ID:

ENSAPLG00000005876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006096

4975675 - 5081506

105832