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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50005570_50045429_F

Intron Information:

Intron Rank:

124736

Intron Class:

major

Intron Phase:

Intron Coordinates:

50005570 - 50045429

Intron Length:

39860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAACAT

U12 Branch Point Sequence:

TTCCACCAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

50.9

0.02

1.1

36.1

Major PPT

84.9

0.78

0.8

85.4

29.4

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

45.9

-0.3

2.1

62.64

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045929

50005536 - 50053221

47686