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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50036014_50045429_F

Intron Information:

Intron Rank:

124733

Intron Class:

major

Intron Phase:

Intron Coordinates:

50036014 - 50045429

Intron Length:

9416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTTTTCTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAACAT

U12 Branch Point Sequence:

TTCCACCAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

73.4

36.4

Major BPS

50.9

0.02

1.1

36.1

Major PPT

84.9

0.78

0.8

85.4

29.4

Minor 5ss

38.5

-1.3

3.3

49.1

41.3

Minor BPS

45.9

-0.3

2.1

62.64

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035724

50035218 - 50053257

18040