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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50045523_50051796_F

Intron Information:

Intron Rank:

124732

Intron Class:

major

Intron Phase:

Intron Coordinates:

50045523 - 50051796

Intron Length:

6274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ACTCTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCCTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.1

0.7

0.8

77.5

30.5

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

71.7

0.76

1.2

78.3

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035724

50035218 - 50053257

18040

ENSAPLT00000030818

49970809 - 50051960

81152

ENSAPLT00000045929

50005536 - 50053221

47686