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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50065129_50072582_F

Intron Information:

Intron Rank:

140058

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50065129 - 50072582

Intron Length:

7454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATGT

5'SS Class:

weak_major

3'SS Sequence:

TTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

65.1

41.6

Major BPS

100

1.24

0.5

100

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

54.6

0.16

2.6

74.3

41.9

Minor BPS

58.4

0.34

1.5

71.47

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022323

50064423 - 50074744

10322