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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50256813_50261313_F

Intron Information:

Intron Rank:

137565

Intron Class:

major

Intron Phase:

Intron Coordinates:

50256813 - 50261313

Intron Length:

4501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

CAGAGCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

70.2

0.5

1.1

77.2

Major PPT

96.4

1.04

0.5

95.9

14.1

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

-0.3

56.19

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041379

50253290 - 50261550

8261