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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50429592_50443797_F

Intron Information:

Intron Rank:

133594

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50429592 - 50443797

Intron Length:

14206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTGCTATTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

TAGTAGTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.2

71.5

41.1

Major BPS

64.3

0.35

1.2

55.4

Major PPT

77.8

0.63

0.9

70.3

40.3

Minor 5ss

69.1

0.65

2.3

37.4

Minor BPS

46.7

-0.2

2.3

61.68

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033260

50429508 - 50474950

45443