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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5043666_5072928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5043666 - 5072928

Intron Length:

29263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAATCTTGAAAT

Flanking Amino Acid:

SGWTHLVAQTETGKVFTWGR

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.6

40.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

73.1

0.52

70.9

40.1

Minor 5ss

32.2

-2

3.4

46.9

48.4

Minor BPS

62.6

0.47

1.5

76.75

38.9

Associated Gene:

Gene:

SERGEF

Ensembl Gene ID:

ENSAPLG00000005876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006096

4975675 - 5081506

105832