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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50499802_50504654_R

Intron Information:

Intron Rank:

129391

Intron Class:

major

Intron Phase:

Intron Coordinates:

50499802 - 50504654

Intron Length:

4853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TAATTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTTTCAGTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

0.6

1.2

75.9

36.3

Major PPT

76.4

0.59

0.9

69.9

40.9

Minor 5ss

33.5

-1.9

41.5

39.2

Minor BPS

48.8

-0.1

2.6

75.46

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043295

50498377 - 50505073

6697