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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50600227_50601497_F

Intron Information:

Intron Rank:

148667

Intron Class:

major

Intron Phase:

Intron Coordinates:

50600227 - 50601497

Intron Length:

1271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTGTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

85.8

25.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

40.8

-1

58.4

46.2

Minor BPS

59.9

0.39

1.6

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027366

50599386 - 50601703

2318