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Intron Name: Anas_platyrhynchos_platyrhynchos_5_50618843_50619381_F

Intron Information:

Intron Rank:

148320

Intron Class:

major

Intron Phase:

Intron Coordinates:

50618843 - 50619381

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCCT

5'SS Class:

major

3'SS Sequence:

CTGTGTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

GCCAGCTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

1.1

66.3

45.2

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

76.2

0.59

69.8

40.3

Minor 5ss

39.1

-1.2

3.4

47.3

Minor BPS

-0

1.8

59.95

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026669

50618795 - 50620734

1940