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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5073088_5075625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5073088 - 5075625

Intron Length:

2538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TCACTTTCAACG

Flanking Amino Acid:

ASSYHSVSLTDEGHLYVWGS

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

77.8

0.63

0.9

73.4

37.1

Minor 5ss

36.5

-1.5

3.6

48.1

Minor BPS

49.5

-0.1

1.6

53.31

41.7

Associated Gene:

Gene:

SERGEF

Ensembl Gene ID:

ENSAPLG00000005876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006096

4975675 - 5081506

105832