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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5075689_5076012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5075689 - 5076012

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCAG

5'SS Class:

major

3'SS Sequence:

GATTTTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTATAAGACT

Flanking Amino Acid:

LSAKEPCEVTGLEDVKVKRV

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

61.7

44.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

78.2

0.64

0.9

70.5

40.9

Minor 5ss

37.3

-1.4

47.3

48.1

Minor BPS

47.9

-0

2.1

76.94

39.7

Associated Gene:

Gene:

SERGEF

Ensembl Gene ID:

ENSAPLG00000005876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006096

4975675 - 5081506

105832