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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5076127_5077342_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5076127 - 5077342

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TTACTCTGGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGTGTCTTAATC

Flanking Amino Acid:

AGLRHALAATESGLVLQWGT

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

56.3

0.14

1.2

60.1

40.5

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

70.5

0.62

1.3

74.33

36.8

Associated Gene:

Gene:

SERGEF

Ensembl Gene ID:

ENSAPLG00000005876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006096

4975675 - 5081506

105832