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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5077404_5079566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5077404 - 5079566

Intron Length:

2163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

TATATTTGAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAT

Flanking Amino Acid:

GPCLTPQKIESLKEKVVDIA

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.9

0.45

1.1

66.7

43.5

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

65.1

0.55

1.6

84.45

36.3

Associated Gene:

Gene:

SERGEF

Ensembl Gene ID:

ENSAPLG00000005876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006096

4975675 - 5081506

105832