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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5080701_5081482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5080701 - 5081482

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGGG

5'SS Class:

major

3'SS Sequence:

TATGTATTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTGAACTT

Flanking Amino Acid:

MAAVLLAWGANSYGQLGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

47.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

68.9

0.43

1.1

68.7

41.1

Minor 5ss

30.3

-2.3

3.3

43.1

Minor BPS

43.8

-0.3

2.4

69.97

42.5

Associated Gene:

Gene:

SERGEF

Ensembl Gene ID:

ENSAPLG00000005876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006096

4975675 - 5081506

105832