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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5084379_5084975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5084379 - 5084975

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

CTATGTTACCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAC

U12 Branch Point Sequence:

GTTCCTCTGACA

Flanking Amino Acid:

SLLSSISGLKHLLSGSAKVK

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

83.4

27.8

Major BPS

62.6

0.31

1.2

55.1

41.7

Major PPT

69.6

0.44

61.8

43.4

Minor 5ss

33.8

-1.9

2.9

41.4

44.7

Minor BPS

56.4

0.19

1.7

69.75

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036327

5083705 - 5089390

5686

ENSAPLT00000021243

5083705 - 5091316

7612

ENSAPLT00000006346

5083705 - 5087688

3984