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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5085053_5086180_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5085053 - 5086180

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGATCCTC

5'SS Class:

weak_major

3'SS Sequence:

TTCTTCCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TCTGTTTCAATG

Flanking Amino Acid:

KLATVSVSVPKFGLCKQEGQ

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.1

50.1

Major BPS

76.9

0.67

1.2

31.9

Major PPT

82.3

0.73

0.7

78.1

23.9

Minor 5ss

39.3

-1.2

3.2

56.6

41.8

Minor BPS

-0.2

1.7

54.05

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036327

5083705 - 5089390

5686

ENSAPLT00000021243

5083705 - 5091316

7612