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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5086324_5086854_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5086324 - 5086854

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGTCAT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATGAT

U12 Branch Point Sequence:

TTGTTTTTGTTT

Flanking Amino Acid:

HGSDPLYTPEPDTCHELLGH

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.3

65.3

42.2

Major BPS

60.7

0.27

1.2

51.5

43.9

Major PPT

87.7

0.85

0.8

80.2

37.3

Minor 5ss

32.3

-2

45.7

42.5

Minor BPS

-0.3

3.4

73.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036327

5083705 - 5089390

5686

ENSAPLT00000021243

5083705 - 5091316

7612

ENSAPLT00000006346

5083705 - 5087688

3984