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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5086982_5087267_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5086982 - 5087267

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTAGAGCGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTCCTTTTTAGA

Flanking Amino Acid:

QLEDVSLFLKGFTIRLVVGY

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

57.8

0.18

1.1

50.5

43.4

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

-0.2

1.9

59.5

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006346

5083705 - 5087688

3984