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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5086991_5087267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5086991 - 5087267

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

CTACATTAAACT

Flanking Amino Acid:

QLEDVSLFLKERAGFTIRLV

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

70.2

0.5

71.6

30.1

Major PPT

83.3

0.75

0.7

81.5

30.4

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

48.8

-0

1.9

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036327

5083705 - 5089390

5686

ENSAPLT00000021243

5083705 - 5091316

7612