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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5087492_5091197_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5087492 - 5091197

Intron Length:

3706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGCTGTGA

5'SS Class:

weak_major

3'SS Sequence:

ACCTTTTATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCATCTTTACAA

Flanking Amino Acid:

VQMLLKFQQPWRVLLSSSPF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.1

48.4

38.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

65.5

0.35

1.1

64.1

40.5

Minor 5ss

29.8

-2.3

3.3

35.4

43.1

Minor BPS

55.8

0.18

1.7

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021243

5083705 - 5091316

7612