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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5087648_5087686_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5087648 - 5087686

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAAGAAT

5'SS Class:

major

3'SS Sequence:

GTGGGAAAGAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

TATCAGTTGATT

Flanking Amino Acid:

IKPLSLKAFQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.1

70.1

35.3

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

39.1

-0.6

1.7

28.8

40.3

Minor 5ss

30.3

-2.3

3.4

43.4

44.3

Minor BPS

47.6

-0.1

2.2

70.52

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006346

5083705 - 5087688

3984