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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5099459_5100616_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
5099459 - 5100616

Intron Length:
1158

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGTTA

5'SS Class:
major

3'SS Sequence:
ATATTTCTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATAGAT

U12 Branch Point Sequence:
AGATGTTGAATA

Flanking Amino Acid:
PNGLLVYKGSGTFLIKPDKK

Intron Amino Acid Position:
158

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.9
0.52
1.1
68.7
38.5

Major BPS
71.4
0.53
1
67
39.8

Major PPT
78.5
0.64
0.9
70.9
40.2

Minor 5ss
39.3
-1.2
3.5
55.9
48.2

Minor BPS
47.6
-0.1
1.8
56.17
36.9

Associated Gene:

Gene:
CYB5R2

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5094981 - 5103400
8420